Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm3P62311 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lsm3P62311 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lsm3P62311 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lsm3P62311 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm3P62311 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lsm3P62311 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm3P62311 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.77■□□□□ 0.6
Lsm3P62311 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lsm3P62311 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lsm3P62311 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.77■□□□□ 0.6
Lsm3P62311 Gm4799-201ENSMUST00000095396 657 ntBASIC18.77■□□□□ 0.6
Lsm3P62311 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lsm3P62311 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm3P62311 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Lsm3P62311 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.76■□□□□ 0.59
Lsm3P62311 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.76■□□□□ 0.59
Lsm3P62311 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 Gm9812-201ENSMUST00000061934 968 ntBASIC18.76■□□□□ 0.59
Lsm3P62311 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lsm3P62311 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm3P62311 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.76■□□□□ 0.59
Lsm3P62311 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Lsm3P62311 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.75■□□□□ 0.59
Lsm3P62311 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.75■□□□□ 0.59
Lsm3P62311 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.75■□□□□ 0.59
Lsm3P62311 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lsm3P62311 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm3P62311 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm3P62311 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Lsm3P62311 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lsm3P62311 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lsm3P62311 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm3P62311 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.73■□□□□ 0.59
Lsm3P62311 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm3P62311 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm3P62311 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lsm3P62311 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.73■□□□□ 0.59
Lsm3P62311 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lsm3P62311 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm3P62311 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lsm3P62311 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Lsm3P62311 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.72■□□□□ 0.59
Lsm3P62311 Terc-201ENSMUST00000082862 423 ntBASIC18.72■□□□□ 0.59
Lsm3P62311 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Lsm3P62311 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm3P62311 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.72■□□□□ 0.59
Lsm3P62311 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm3P62311 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm3P62311 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.71■□□□□ 0.59
Lsm3P62311 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm3P62311 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm3P62311 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lsm3P62311 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm3P62311 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.7■□□□□ 0.58
Lsm3P62311 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm3P62311 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms