Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdkn2bP55271 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.83■□□□□ 0.77
Cdkn2bP55271 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdkn2bP55271 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn2bP55271 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn2bP55271 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn2bP55271 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdkn2bP55271 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cdkn2bP55271 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.82■□□□□ 0.76
Cdkn2bP55271 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cdkn2bP55271 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.82■□□□□ 0.76
Cdkn2bP55271 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdkn2bP55271 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdkn2bP55271 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdkn2bP55271 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cdkn2bP55271 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.79■□□□□ 0.76
Cdkn2bP55271 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdkn2bP55271 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cdkn2bP55271 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdkn2bP55271 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Gm10420-201ENSMUST00000121713 882 ntBASIC19.77■□□□□ 0.76
Cdkn2bP55271 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkn2bP55271 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.77■□□□□ 0.76
Cdkn2bP55271 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.77■□□□□ 0.75
Cdkn2bP55271 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Cdkn2bP55271 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdkn2bP55271 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Gm12366-201ENSMUST00000121722 873 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Gm5786-201ENSMUST00000085368 882 ntBASIC19.76■□□□□ 0.75
Cdkn2bP55271 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkn2bP55271 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms