Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SftpbP50405 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SftpbP50405 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SftpbP50405 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SftpbP50405 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SftpbP50405 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SftpbP50405 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SftpbP50405 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SftpbP50405 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.06■□□□□ 0.96
SftpbP50405 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SftpbP50405 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SftpbP50405 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SftpbP50405 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SftpbP50405 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SftpbP50405 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.05■□□□□ 0.96
SftpbP50405 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SftpbP50405 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SftpbP50405 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SftpbP50405 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SftpbP50405 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SftpbP50405 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SftpbP50405 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SftpbP50405 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SftpbP50405 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SftpbP50405 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.03■□□□□ 0.96
SftpbP50405 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SftpbP50405 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SftpbP50405 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.03■□□□□ 0.96
SftpbP50405 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.03■□□□□ 0.96
SftpbP50405 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SftpbP50405 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SftpbP50405 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.03■□□□□ 0.96
SftpbP50405 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
SftpbP50405 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SftpbP50405 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SftpbP50405 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.02■□□□□ 0.96
SftpbP50405 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.02■□□□□ 0.96
SftpbP50405 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SftpbP50405 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SftpbP50405 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SftpbP50405 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SftpbP50405 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SftpbP50405 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.01■□□□□ 0.95
SftpbP50405 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SftpbP50405 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SftpbP50405 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SftpbP50405 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21■□□□□ 0.95
SftpbP50405 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21■□□□□ 0.95
SftpbP50405 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Gm8093-201ENSMUST00000128935 1892 ntBASIC21■□□□□ 0.95
SftpbP50405 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21■□□□□ 0.95
SftpbP50405 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
SftpbP50405 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SftpbP50405 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SftpbP50405 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SftpbP50405 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SftpbP50405 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SftpbP50405 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.98■□□□□ 0.95
SftpbP50405 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SftpbP50405 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SftpbP50405 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SftpbP50405 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SftpbP50405 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SftpbP50405 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SftpbP50405 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms