Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx2-2P42586 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-2P42586 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-2P42586 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-2P42586 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-2P42586 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-2P42586 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.02■□□□□ 0.64
Nkx2-2P42586 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx2-2P42586 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nkx2-2P42586 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Nkx2-2P42586 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-2P42586 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-2P42586 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.01■□□□□ 0.63
Nkx2-2P42586 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-2P42586 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19■□□□□ 0.63
Nkx2-2P42586 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-2P42586 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-2P42586 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19■□□□□ 0.63
Nkx2-2P42586 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-2P42586 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-2P42586 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.99■□□□□ 0.63
Nkx2-2P42586 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-2P42586 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-2P42586 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Nkx2-2P42586 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-2P42586 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nkx2-2P42586 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-2P42586 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.98■□□□□ 0.63
Nkx2-2P42586 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-2P42586 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-2P42586 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Nkx2-2P42586 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-2P42586 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-2P42586 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-2P42586 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-2P42586 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.96■□□□□ 0.63
Nkx2-2P42586 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-2P42586 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-2P42586 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-2P42586 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-2P42586 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-2P42586 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-2P42586 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.62
Nkx2-2P42586 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-2P42586 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-2P42586 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-2P42586 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-2P42586 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-2P42586 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.95■□□□□ 0.62
Nkx2-2P42586 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.94■□□□□ 0.62
Nkx2-2P42586 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Gm7417-201ENSMUST00000192950 473 ntBASIC18.93■□□□□ 0.62
Nkx2-2P42586 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.93■□□□□ 0.62
Nkx2-2P42586 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-2P42586 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.92■□□□□ 0.62
Nkx2-2P42586 Gm9959-201ENSMUST00000068277 390 ntBASIC18.92■□□□□ 0.62
Nkx2-2P42586 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms