Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf2P39429 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.79■□□□□ 0.92
Traf2P39429 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Traf2P39429 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Traf2P39429 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.78■□□□□ 0.92
Traf2P39429 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Traf2P39429 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Traf2P39429 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Traf2P39429 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Traf2P39429 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Traf2P39429 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Traf2P39429 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Traf2P39429 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Traf2P39429 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.77■□□□□ 0.92
Traf2P39429 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Traf2P39429 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.76■□□□□ 0.91
Traf2P39429 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Traf2P39429 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Traf2P39429 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf2P39429 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Traf2P39429 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Traf2P39429 Gm7417-201ENSMUST00000192950 473 ntBASIC20.75■□□□□ 0.91
Traf2P39429 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.75■□□□□ 0.91
Traf2P39429 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf2P39429 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf2P39429 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.75■□□□□ 0.91
Traf2P39429 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Traf2P39429 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.74■□□□□ 0.91
Traf2P39429 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Traf2P39429 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Traf2P39429 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Traf2P39429 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Traf2P39429 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Traf2P39429 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.73■□□□□ 0.91
Traf2P39429 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Traf2P39429 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.73■□□□□ 0.91
Traf2P39429 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Traf2P39429 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Traf2P39429 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Traf2P39429 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Traf2P39429 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Traf2P39429 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Traf2P39429 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Traf2P39429 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.71■□□□□ 0.91
Traf2P39429 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Traf2P39429 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.7■□□□□ 0.9
Traf2P39429 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Traf2P39429 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.7■□□□□ 0.9
Traf2P39429 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.7■□□□□ 0.9
Traf2P39429 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Traf2P39429 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Traf2P39429 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Traf2P39429 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.69■□□□□ 0.9
Traf2P39429 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Traf2P39429 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Traf2P39429 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Traf2P39429 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Traf2P39429 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.69■□□□□ 0.9
Traf2P39429 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.68■□□□□ 0.9
Traf2P39429 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Traf2P39429 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Traf2P39429 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.67■□□□□ 0.9
Traf2P39429 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Traf2P39429 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Traf2P39429 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Traf2P39429 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms