Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl3P27659 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl3P27659 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl3P27659 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl3P27659 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl3P27659 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Rpl3P27659 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl3P27659 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl3P27659 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rpl3P27659 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl3P27659 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl3P27659 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl3P27659 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpl3P27659 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.61■□□□□ 0.73
Rpl3P27659 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
Rpl3P27659 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpl3P27659 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rpl3P27659 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl3P27659 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Rpl3P27659 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rpl3P27659 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Rpl3P27659 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.59■□□□□ 0.73
Rpl3P27659 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpl3P27659 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl3P27659 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Rpl3P27659 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl3P27659 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpl3P27659 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.58■□□□□ 0.72
Rpl3P27659 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rpl3P27659 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl3P27659 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl3P27659 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.57■□□□□ 0.72
Rpl3P27659 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl3P27659 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.57■□□□□ 0.72
Rpl3P27659 Gm5921-201ENSMUST00000075898 882 ntBASIC19.57■□□□□ 0.72
Rpl3P27659 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rpl3P27659 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl3P27659 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpl3P27659 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.57■□□□□ 0.72
Rpl3P27659 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rpl3P27659 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 Gm43566-201ENSMUST00000196851 808 ntBASIC19.56■□□□□ 0.72
Rpl3P27659 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.56■□□□□ 0.72
Rpl3P27659 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl3P27659 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.55■□□□□ 0.72
Rpl3P27659 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpl3P27659 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpl3P27659 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl3P27659 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rpl3P27659 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rpl3P27659 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl3P27659 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl3P27659 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl3P27659 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl3P27659 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl3P27659 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl3P27659 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.53■□□□□ 0.72
Rpl3P27659 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl3P27659 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.53■□□□□ 0.72
Rpl3P27659 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl3P27659 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.53■□□□□ 0.72
Rpl3P27659 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl3P27659 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl3P27659 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpl3P27659 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl3P27659 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl3P27659 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl3P27659 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl3P27659 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms