Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tnfrsf9P20334 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Gm29257-201ENSMUST00000186115 639 ntBASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tnfrsf9P20334 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Gm8495-201ENSMUST00000188740 694 ntBASIC16.61■□□□□ 0.25
Tnfrsf9P20334 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tnfrsf9P20334 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.6■□□□□ 0.25
Tnfrsf9P20334 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tnfrsf9P20334 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tnfrsf9P20334 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf9P20334 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf9P20334 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf9P20334 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tnfrsf9P20334 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
Tnfrsf9P20334 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf9P20334 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.58■□□□□ 0.24
Tnfrsf9P20334 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf9P20334 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tnfrsf9P20334 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Gm18284-201ENSMUST00000172604 624 ntBASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tnfrsf9P20334 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.57■□□□□ 0.24
Tnfrsf9P20334 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tnfrsf9P20334 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tnfrsf9P20334 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tnfrsf9P20334 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms