Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VimP20152 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
VimP20152 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
VimP20152 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VimP20152 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VimP20152 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VimP20152 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VimP20152 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.91■□□□□ 0.94
VimP20152 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VimP20152 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VimP20152 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VimP20152 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VimP20152 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VimP20152 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VimP20152 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.9■□□□□ 0.94
VimP20152 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VimP20152 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VimP20152 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VimP20152 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VimP20152 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.89■□□□□ 0.93
VimP20152 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VimP20152 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VimP20152 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.88■□□□□ 0.93
VimP20152 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VimP20152 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VimP20152 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.88■□□□□ 0.93
VimP20152 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VimP20152 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
VimP20152 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VimP20152 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VimP20152 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VimP20152 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VimP20152 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.87■□□□□ 0.93
VimP20152 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VimP20152 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.87■□□□□ 0.93
VimP20152 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VimP20152 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VimP20152 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VimP20152 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
VimP20152 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VimP20152 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.86■□□□□ 0.93
VimP20152 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
VimP20152 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VimP20152 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VimP20152 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.86■□□□□ 0.93
VimP20152 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VimP20152 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VimP20152 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.85■□□□□ 0.93
VimP20152 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.85■□□□□ 0.93
VimP20152 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.85■□□□□ 0.93
VimP20152 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.85■□□□□ 0.93
VimP20152 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
VimP20152 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
VimP20152 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
VimP20152 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.84■□□□□ 0.93
VimP20152 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VimP20152 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms