Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccl3P10855 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccl3P10855 Gm5874-201ENSMUST00000096101 508 ntBASIC18.45■□□□□ 0.54
Ccl3P10855 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.45■□□□□ 0.54
Ccl3P10855 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccl3P10855 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccl3P10855 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccl3P10855 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccl3P10855 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccl3P10855 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl3P10855 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl3P10855 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl3P10855 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccl3P10855 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl3P10855 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccl3P10855 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccl3P10855 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.42■□□□□ 0.54
Ccl3P10855 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccl3P10855 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ccl3P10855 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.42■□□□□ 0.54
Ccl3P10855 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccl3P10855 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccl3P10855 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.4■□□□□ 0.54
Ccl3P10855 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.4■□□□□ 0.54
Ccl3P10855 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccl3P10855 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.4■□□□□ 0.54
Ccl3P10855 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccl3P10855 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccl3P10855 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.39■□□□□ 0.53
Ccl3P10855 Gm43530-201ENSMUST00000195920 274 ntBASIC18.39■□□□□ 0.53
Ccl3P10855 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.39■□□□□ 0.53
Ccl3P10855 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccl3P10855 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Ccl3P10855 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccl3P10855 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.38■□□□□ 0.53
Ccl3P10855 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
Ccl3P10855 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccl3P10855 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.38■□□□□ 0.53
Ccl3P10855 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl3P10855 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.37■□□□□ 0.53
Ccl3P10855 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl3P10855 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccl3P10855 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl3P10855 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ccl3P10855 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccl3P10855 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccl3P10855 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccl3P10855 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl3P10855 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl3P10855 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl3P10855 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl3P10855 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ccl3P10855 Spcs1-204ENSMUST00000226782 949 ntBASIC18.36■□□□□ 0.53
Ccl3P10855 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccl3P10855 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccl3P10855 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccl3P10855 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Ccl3P10855 Gm26833-201ENSMUST00000180899 440 ntBASIC18.35■□□□□ 0.53
Ccl3P10855 Gm29257-201ENSMUST00000186115 639 ntBASIC18.35■□□□□ 0.53
Ccl3P10855 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccl3P10855 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
Ccl3P10855 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccl3P10855 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms