Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Serp2-204ENSMUST00000228055 705 ntBASIC21.07■□□□□ 0.96
Rc3h2P0C090 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rc3h2P0C090 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h2P0C090 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h2P0C090 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.05■□□□□ 0.96
Rc3h2P0C090 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h2P0C090 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h2P0C090 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h2P0C090 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h2P0C090 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rc3h2P0C090 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h2P0C090 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.03■□□□□ 0.96
Rc3h2P0C090 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h2P0C090 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h2P0C090 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h2P0C090 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h2P0C090 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h2P0C090 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h2P0C090 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.01■□□□□ 0.95
Rc3h2P0C090 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rc3h2P0C090 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.01■□□□□ 0.95
Rc3h2P0C090 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h2P0C090 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.01■□□□□ 0.95
Rc3h2P0C090 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h2P0C090 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rc3h2P0C090 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rc3h2P0C090 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h2P0C090 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21■□□□□ 0.95
Rc3h2P0C090 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h2P0C090 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rc3h2P0C090 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h2P0C090 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21■□□□□ 0.95
Rc3h2P0C090 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h2P0C090 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h2P0C090 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h2P0C090 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Rc3h2P0C090 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Gm43137-201ENSMUST00000198052 594 ntBASIC20.98■□□□□ 0.95
Rc3h2P0C090 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rc3h2P0C090 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h2P0C090 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h2P0C090 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h2P0C090 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
Rc3h2P0C090 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rc3h2P0C090 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h2P0C090 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h2P0C090 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rc3h2P0C090 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rc3h2P0C090 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rc3h2P0C090 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rc3h2P0C090 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.94■□□□□ 0.94
Rc3h2P0C090 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.94■□□□□ 0.94
Rc3h2P0C090 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h2P0C090 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rc3h2P0C090 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rc3h2P0C090 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms