Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Hoxa3P02831 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxa3P02831 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Gm13241-201ENSMUST00000094493 780 ntBASIC17.27■□□□□ 0.36
Hoxa3P02831 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa3P02831 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa3P02831 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa3P02831 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa3P02831 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa3P02831 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa3P02831 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxa3P02831 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxa3P02831 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hoxa3P02831 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.26■□□□□ 0.35
Hoxa3P02831 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa3P02831 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa3P02831 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hoxa3P02831 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxa3P02831 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa3P02831 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxa3P02831 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
Hoxa3P02831 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa3P02831 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa3P02831 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxa3P02831 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa3P02831 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hoxa3P02831 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Hoxa3P02831 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa3P02831 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hoxa3P02831 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Gm12922-201ENSMUST00000120626 809 ntBASIC17.24■□□□□ 0.35
Hoxa3P02831 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxa3P02831 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxa3P02831 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.24■□□□□ 0.35
Hoxa3P02831 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxa3P02831 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxa3P02831 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.23■□□□□ 0.35
Hoxa3P02831 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.23■□□□□ 0.35
Hoxa3P02831 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxa3P02831 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxa3P02831 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.22■□□□□ 0.35
Hoxa3P02831 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hoxa3P02831 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxa3P02831 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.21■□□□□ 0.35
Hoxa3P02831 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hoxa3P02831 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hoxa3P02831 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hoxa3P02831 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hoxa3P02831 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.21■□□□□ 0.34
Hoxa3P02831 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hoxa3P02831 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hoxa3P02831 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hoxa3P02831 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.19■□□□□ 0.34
Hoxa3P02831 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.19■□□□□ 0.34
Hoxa3P02831 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hoxa3P02831 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 199.4 ms