Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Syn1O88935 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.44■■□□□ 1.02
Syn1O88935 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Syn1O88935 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Syn1O88935 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.44■■□□□ 1.02
Syn1O88935 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.44■■□□□ 1.02
Syn1O88935 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syn1O88935 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syn1O88935 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syn1O88935 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Syn1O88935 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.43■■□□□ 1.02
Syn1O88935 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.43■■□□□ 1.02
Syn1O88935 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
Syn1O88935 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Syn1O88935 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Syn1O88935 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Syn1O88935 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.42■■□□□ 1.02
Syn1O88935 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.42■■□□□ 1.02
Syn1O88935 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Syn1O88935 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Syn1O88935 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Syn1O88935 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.41■■□□□ 1.02
Syn1O88935 AV356131-201ENSMUST00000206201 750 ntBASIC21.41■■□□□ 1.02
Syn1O88935 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Syn1O88935 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Syn1O88935 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Syn1O88935 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Syn1O88935 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.4■■□□□ 1.02
Syn1O88935 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Syn1O88935 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Syn1O88935 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Syn1O88935 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Syn1O88935 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.39■■□□□ 1.01
Syn1O88935 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Syn1O88935 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Syn1O88935 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Syn1O88935 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Syn1O88935 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Syn1O88935 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Syn1O88935 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Syn1O88935 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Syn1O88935 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Syn1O88935 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Syn1O88935 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Syn1O88935 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.37■■□□□ 1.01
Syn1O88935 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Syn1O88935 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Syn1O88935 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.37■■□□□ 1.01
Syn1O88935 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Syn1O88935 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
Syn1O88935 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Syn1O88935 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Syn1O88935 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.36■■□□□ 1.01
Syn1O88935 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Syn1O88935 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Syn1O88935 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Syn1O88935 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Syn1O88935 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Syn1O88935 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.35■■□□□ 1.01
Syn1O88935 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.35■■□□□ 1.01
Syn1O88935 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.35■■□□□ 1.01
Syn1O88935 Gm10033-202ENSMUST00000211874 928 ntBASIC21.35■■□□□ 1.01
Syn1O88935 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.35■■□□□ 1.01
Syn1O88935 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Syn1O88935 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Syn1O88935 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Syn1O88935 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Syn1O88935 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.34■■□□□ 1.01
Syn1O88935 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syn1O88935 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syn1O88935 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Syn1O88935 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Syn1O88935 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Syn1O88935 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syn1O88935 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Syn1O88935 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Syn1O88935 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Syn1O88935 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Syn1O88935 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Syn1O88935 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Syn1O88935 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms