Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hcn3O88705 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Hcn3O88705 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.74■□□□□ 0.75
Hcn3O88705 Gm27502-201ENSMUST00000183495 199 ntBASIC19.74■□□□□ 0.75
Hcn3O88705 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.74■□□□□ 0.75
Hcn3O88705 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hcn3O88705 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.74■□□□□ 0.75
Hcn3O88705 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn3O88705 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hcn3O88705 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn3O88705 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.73■□□□□ 0.75
Hcn3O88705 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn3O88705 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.73■□□□□ 0.75
Hcn3O88705 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn3O88705 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hcn3O88705 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcn3O88705 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hcn3O88705 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcn3O88705 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn3O88705 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hcn3O88705 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcn3O88705 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.71■□□□□ 0.75
Hcn3O88705 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hcn3O88705 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hcn3O88705 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn3O88705 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn3O88705 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn3O88705 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.7■□□□□ 0.74
Hcn3O88705 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hcn3O88705 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.7■□□□□ 0.74
Hcn3O88705 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcn3O88705 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.69■□□□□ 0.74
Hcn3O88705 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.69■□□□□ 0.74
Hcn3O88705 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcn3O88705 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hcn3O88705 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Hcn3O88705 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.68■□□□□ 0.74
Hcn3O88705 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Hcn3O88705 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.68■□□□□ 0.74
Hcn3O88705 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcn3O88705 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.67■□□□□ 0.74
Hcn3O88705 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Gm12366-201ENSMUST00000121722 873 ntBASIC19.67■□□□□ 0.74
Hcn3O88705 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.67■□□□□ 0.74
Hcn3O88705 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.67■□□□□ 0.74
Hcn3O88705 Gm5786-201ENSMUST00000085368 882 ntBASIC19.67■□□□□ 0.74
Hcn3O88705 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.67■□□□□ 0.74
Hcn3O88705 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcn3O88705 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Hcn3O88705 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.66■□□□□ 0.74
Hcn3O88705 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.66■□□□□ 0.74
Hcn3O88705 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcn3O88705 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hcn3O88705 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcn3O88705 Gm14523-201ENSMUST00000117260 558 ntBASIC19.65■□□□□ 0.74
Hcn3O88705 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms