Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Alx3O70137 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx3O70137 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Alx3O70137 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx3O70137 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Alx3O70137 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.68■□□□□ 0.58
Alx3O70137 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Alx3O70137 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.68■□□□□ 0.58
Alx3O70137 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Alx3O70137 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Alx3O70137 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Alx3O70137 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.67■□□□□ 0.58
Alx3O70137 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.67■□□□□ 0.58
Alx3O70137 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.67■□□□□ 0.58
Alx3O70137 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Alx3O70137 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx3O70137 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx3O70137 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx3O70137 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx3O70137 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.66■□□□□ 0.58
Alx3O70137 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx3O70137 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Alx3O70137 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.66■□□□□ 0.58
Alx3O70137 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Alx3O70137 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Alx3O70137 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.65■□□□□ 0.58
Alx3O70137 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.64■□□□□ 0.58
Alx3O70137 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Alx3O70137 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx3O70137 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.64■□□□□ 0.57
Alx3O70137 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx3O70137 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.64■□□□□ 0.57
Alx3O70137 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Alx3O70137 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.64■□□□□ 0.57
Alx3O70137 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Alx3O70137 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.63■□□□□ 0.57
Alx3O70137 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Alx3O70137 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Alx3O70137 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Alx3O70137 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Alx3O70137 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.63■□□□□ 0.57
Alx3O70137 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Alx3O70137 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Alx3O70137 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx3O70137 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Alx3O70137 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.62■□□□□ 0.57
Alx3O70137 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.62■□□□□ 0.57
Alx3O70137 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Alx3O70137 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx3O70137 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Alx3O70137 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx3O70137 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Alx3O70137 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Alx3O70137 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.61■□□□□ 0.57
Alx3O70137 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Golph3-202ENSMUST00000226517 2359 ntBASIC18.61■□□□□ 0.57
Alx3O70137 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Alx3O70137 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Alx3O70137 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.6■□□□□ 0.57
Alx3O70137 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Alx3O70137 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Alx3O70137 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.59■□□□□ 0.57
Alx3O70137 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Alx3O70137 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Alx3O70137 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms