Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pcf11G3X9Z4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Pcf11G3X9Z4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Pcf11G3X9Z4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pcf11G3X9Z4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pcf11G3X9Z4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC32.01■■■□□ 2.72
Pcf11G3X9Z4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC32■■■□□ 2.71
Pcf11G3X9Z4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pcf11G3X9Z4 Gm43759-201ENSMUST00000196925 1261 ntBASIC32■■■□□ 2.71
Pcf11G3X9Z4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Pcf11G3X9Z4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC31.99■■■□□ 2.71
Pcf11G3X9Z4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
Pcf11G3X9Z4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC31.99■■■□□ 2.71
Pcf11G3X9Z4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Pcf11G3X9Z4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Pcf11G3X9Z4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 Mir7075-201ENSMUST00000184187 82 ntBASIC31.98■■■□□ 2.71
Pcf11G3X9Z4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC31.97■■■□□ 2.71
Pcf11G3X9Z4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcf11G3X9Z4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcf11G3X9Z4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Pcf11G3X9Z4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Pcf11G3X9Z4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
Pcf11G3X9Z4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC31.95■■■□□ 2.71
Pcf11G3X9Z4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Pcf11G3X9Z4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
Pcf11G3X9Z4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Pcf11G3X9Z4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Pcf11G3X9Z4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pcf11G3X9Z4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pcf11G3X9Z4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pcf11G3X9Z4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pcf11G3X9Z4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Pcf11G3X9Z4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Pcf11G3X9Z4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pcf11G3X9Z4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Pcf11G3X9Z4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pcf11G3X9Z4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC31.92■■■□□ 2.7
Pcf11G3X9Z4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Pcf11G3X9Z4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pcf11G3X9Z4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pcf11G3X9Z4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Pcf11G3X9Z4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Pcf11G3X9Z4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
Pcf11G3X9Z4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Gm18284-201ENSMUST00000172604 624 ntBASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Gm21168-201ENSMUST00000199646 1096 ntBASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Pcf11G3X9Z4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcf11G3X9Z4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcf11G3X9Z4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcf11G3X9Z4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcf11G3X9Z4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
Pcf11G3X9Z4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC31.88■■■□□ 2.69
Pcf11G3X9Z4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC31.88■■■□□ 2.69
Pcf11G3X9Z4 Gm5576-201ENSMUST00000075809 1236 ntBASIC31.88■■■□□ 2.69
Pcf11G3X9Z4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pcf11G3X9Z4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pcf11G3X9Z4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Spcs1-204ENSMUST00000226782 949 ntBASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC31.86■■■□□ 2.69
Pcf11G3X9Z4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.85■■■□□ 2.69
Pcf11G3X9Z4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC31.84■■■□□ 2.69
Pcf11G3X9Z4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Pcf11G3X9Z4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms