Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm12887B1AVM1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Gm12887B1AVM1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Gm8503-201ENSMUST00000118131 455 ntBASIC16.7■□□□□ 0.26
Gm12887B1AVM1 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.7■□□□□ 0.26
Gm12887B1AVM1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Gm12887B1AVM1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12887B1AVM1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.68■□□□□ 0.26
Gm12887B1AVM1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.68■□□□□ 0.26
Gm12887B1AVM1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12887B1AVM1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gm12887B1AVM1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12887B1AVM1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Gm12887B1AVM1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm12887B1AVM1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm12887B1AVM1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12887B1AVM1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12887B1AVM1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Gm12887B1AVM1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms