Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Krt28A6BLY7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Krt28A6BLY7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Krt28A6BLY7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Krt28A6BLY7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.23■■□□□ 1.31
Krt28A6BLY7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Krt28A6BLY7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Krt28A6BLY7 Gm18671-201ENSMUST00000214826 683 ntBASIC23.23■■□□□ 1.31
Krt28A6BLY7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Krt28A6BLY7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Krt28A6BLY7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Krt28A6BLY7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Krt28A6BLY7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.21■■□□□ 1.31
Krt28A6BLY7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Krt28A6BLY7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Krt28A6BLY7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.2■■□□□ 1.3
Krt28A6BLY7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Krt28A6BLY7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Krt28A6BLY7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
Krt28A6BLY7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Krt28A6BLY7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.17■■□□□ 1.3
Krt28A6BLY7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Krt28A6BLY7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Krt28A6BLY7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Krt28A6BLY7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Krt28A6BLY7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.15■■□□□ 1.3
Krt28A6BLY7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Krt28A6BLY7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Krt28A6BLY7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Krt28A6BLY7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Krt28A6BLY7 Gm43530-201ENSMUST00000195920 274 ntBASIC23.14■■□□□ 1.29
Krt28A6BLY7 AV356131-201ENSMUST00000206201 750 ntBASIC23.14■■□□□ 1.29
Krt28A6BLY7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Krt28A6BLY7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Krt28A6BLY7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Krt28A6BLY7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Krt28A6BLY7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Krt28A6BLY7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Krt28A6BLY7 Smad6-203ENSMUST00000179458 273 ntBASIC23.12■■□□□ 1.29
Krt28A6BLY7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
Krt28A6BLY7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Gm42778-201ENSMUST00000199644 553 ntBASIC23.11■■□□□ 1.29
Krt28A6BLY7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Krt28A6BLY7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Gm10033-202ENSMUST00000211874 928 ntBASIC23.1■■□□□ 1.29
Krt28A6BLY7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Krt28A6BLY7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.1■■□□□ 1.29
Krt28A6BLY7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Krt28A6BLY7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Krt28A6BLY7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Krt28A6BLY7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Krt28A6BLY7 Gm10602-201ENSMUST00000098239 609 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms