Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Shroom2A2ALU4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Shroom2A2ALU4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
Shroom2A2ALU4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Shroom2A2ALU4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Shroom2A2ALU4 Gm4968-201ENSMUST00000071458 858 ntBASIC33.74■■■□□ 2.99
Shroom2A2ALU4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Shroom2A2ALU4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Shroom2A2ALU4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Shroom2A2ALU4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Shroom2A2ALU4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Shroom2A2ALU4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Gm12527-201ENSMUST00000117967 564 ntBASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Gm42778-201ENSMUST00000199644 553 ntBASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Gm7143-201ENSMUST00000222811 859 ntBASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Shroom2A2ALU4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC33.71■■■□□ 2.99
Shroom2A2ALU4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Shroom2A2ALU4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC33.7■■■□□ 2.99
Shroom2A2ALU4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC33.7■■■□□ 2.99
Shroom2A2ALU4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Shroom2A2ALU4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Shroom2A2ALU4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Shroom2A2ALU4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC33.69■■■□□ 2.98
Shroom2A2ALU4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Shroom2A2ALU4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
Shroom2A2ALU4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
Shroom2A2ALU4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Shroom2A2ALU4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Shroom2A2ALU4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC33.68■■■□□ 2.98
Shroom2A2ALU4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC33.68■■■□□ 2.98
Shroom2A2ALU4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Shroom2A2ALU4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC33.68■■■□□ 2.98
Shroom2A2ALU4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC33.67■■■□□ 2.98
Shroom2A2ALU4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Shroom2A2ALU4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC33.67■■■□□ 2.98
Shroom2A2ALU4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC33.67■■■□□ 2.98
Shroom2A2ALU4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Shroom2A2ALU4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC33.66■■■□□ 2.98
Shroom2A2ALU4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Shroom2A2ALU4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC33.66■■■□□ 2.98
Shroom2A2ALU4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
Shroom2A2ALU4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC33.66■■■□□ 2.98
Shroom2A2ALU4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC33.65■■■□□ 2.98
Shroom2A2ALU4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Shroom2A2ALU4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Shroom2A2ALU4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Shroom2A2ALU4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC33.64■■■□□ 2.98
Shroom2A2ALU4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Shroom2A2ALU4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC33.64■■■□□ 2.98
Shroom2A2ALU4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Shroom2A2ALU4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Shroom2A2ALU4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Shroom2A2ALU4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Shroom2A2ALU4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Shroom2A2ALU4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Shroom2A2ALU4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
Shroom2A2ALU4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Shroom2A2ALU4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC33.61■■■□□ 2.97
Shroom2A2ALU4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Shroom2A2ALU4 Gm10209-201ENSMUST00000203397 1607 ntBASIC33.61■■■□□ 2.97
Shroom2A2ALU4 Gm29241-201ENSMUST00000189260 1096 ntBASIC33.6■■■□□ 2.97
Shroom2A2ALU4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC33.6■■■□□ 2.97
Shroom2A2ALU4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Shroom2A2ALU4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Shroom2A2ALU4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Shroom2A2ALU4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC33.59■■■□□ 2.97
Shroom2A2ALU4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Shroom2A2ALU4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Shroom2A2ALU4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
Shroom2A2ALU4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC33.57■■■□□ 2.97
Shroom2A2ALU4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
Shroom2A2ALU4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC33.57■■■□□ 2.97
Shroom2A2ALU4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
Shroom2A2ALU4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Gm13836-201ENSMUST00000121159 501 ntBASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
Shroom2A2ALU4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC33.55■■■□□ 2.96
Shroom2A2ALU4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Shroom2A2ALU4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Shroom2A2ALU4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC33.55■■■□□ 2.96
Shroom2A2ALU4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Shroom2A2ALU4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Shroom2A2ALU4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Shroom2A2ALU4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC33.53■■■□□ 2.96
Shroom2A2ALU4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC33.53■■■□□ 2.96
Shroom2A2ALU4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Shroom2A2ALU4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Shroom2A2ALU4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC33.52■■■□□ 2.96
Shroom2A2ALU4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Shroom2A2ALU4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Shroom2A2ALU4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC33.51■■■□□ 2.96
Shroom2A2ALU4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
Shroom2A2ALU4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms