Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trdv2-1A0A0G2JGB9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trdv2-1A0A0G2JGB9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trdv2-1A0A0G2JGB9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trdv2-1A0A0G2JGB9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trdv2-1A0A0G2JGB9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.05■□□□□ 0
Trdv2-1A0A0G2JGB9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trdv2-1A0A0G2JGB9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trdv2-1A0A0G2JGB9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trdv2-1A0A0G2JGB9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trdv2-1A0A0G2JGB9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdv2-1A0A0G2JGB9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trdv2-1A0A0G2JGB9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Trdv2-1A0A0G2JGB9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.02■□□□□ -0
Trdv2-1A0A0G2JGB9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.02□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Gm4799-201ENSMUST00000095396 657 ntBASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trdv2-1A0A0G2JGB9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms