Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Grk6-206ENSMUST00000224995 2971 ntBASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tcrg-V4A0A0B4J1J8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm24804-201ENSMUST00000174982 85 ntBASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.38■□□□□ 0.05
Tcrg-V4A0A0B4J1J8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms