Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv2A0A0B4J1G8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv2A0A0B4J1G8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv2A0A0B4J1G8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv2A0A0B4J1G8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv2A0A0B4J1G8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv2A0A0B4J1G8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv2A0A0B4J1G8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv2A0A0B4J1G8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv2A0A0B4J1G8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.33■□□□□ 0.52
Trbv2A0A0B4J1G8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv2A0A0B4J1G8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv2A0A0B4J1G8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv2A0A0B4J1G8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv2A0A0B4J1G8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv2A0A0B4J1G8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv2A0A0B4J1G8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv2A0A0B4J1G8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trbv2A0A0B4J1G8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv2A0A0B4J1G8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv2A0A0B4J1G8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv2A0A0B4J1G8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms