Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv15A0A0A6YYE3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv15A0A0A6YYE3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv15A0A0A6YYE3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trbv15A0A0A6YYE3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trbv15A0A0A6YYE3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trbv15A0A0A6YYE3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trbv15A0A0A6YYE3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trbv15A0A0A6YYE3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv15A0A0A6YYE3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv15A0A0A6YYE3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.11■□□□□ 0.33
Trbv15A0A0A6YYE3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv15A0A0A6YYE3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv15A0A0A6YYE3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv15A0A0A6YYE3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv15A0A0A6YYE3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms