Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm44428-201ENSMUST00000204474 874 ntBASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv3A0A0A6YYE2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv3A0A0A6YYE2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv3A0A0A6YYE2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv3A0A0A6YYE2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.9■□□□□ 0.14
Trbv3A0A0A6YYE2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv3A0A0A6YYE2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv3A0A0A6YYE2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trbv3A0A0A6YYE2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms