Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Gm8503-201ENSMUST00000118131 455 ntBASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-2A0A075B638 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav4-2A0A075B638 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-2A0A075B638 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-2A0A075B638 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-2A0A075B638 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-2A0A075B638 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-2A0A075B638 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trav4-2A0A075B638 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-2A0A075B638 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-2A0A075B638 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-2A0A075B638 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-2A0A075B638 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-2A0A075B638 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms