Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4n-4A0A075B615 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Trav4n-4A0A075B615 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4n-4A0A075B615 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4n-4A0A075B615 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4n-4A0A075B615 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.3□□□□□ -0.12
Trav4n-4A0A075B615 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Zfp131-205ENSMUST00000223812 663 ntBASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4n-4A0A075B615 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4n-4A0A075B615 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav4n-4A0A075B615 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4n-4A0A075B615 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms