Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav9-1A0A075B601 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9-1A0A075B601 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav9-1A0A075B601 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav9-1A0A075B601 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav9-1A0A075B601 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Cap2-205ENSMUST00000225824 1634 ntBASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav9-1A0A075B601 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav9-1A0A075B601 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav9-1A0A075B601 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav9-1A0A075B601 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-1A0A075B601 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.02■□□□□ 0.16
Trav9-1A0A075B601 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-1A0A075B601 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav9-1A0A075B601 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.02■□□□□ 0.16
Trav9-1A0A075B601 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9-1A0A075B601 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9-1A0A075B601 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms