Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv4A0A075B5I2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv4A0A075B5I2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trbv4A0A075B5I2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv4A0A075B5I2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trbv4A0A075B5I2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trbv4A0A075B5I2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trbv4A0A075B5I2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.77■□□□□ 0.92
Trbv4A0A075B5I2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trbv4A0A075B5I2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trbv4A0A075B5I2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trbv4A0A075B5I2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv4A0A075B5I2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv4A0A075B5I2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv4A0A075B5I2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.72■□□□□ 0.91
Trbv4A0A075B5I2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.72■□□□□ 0.91
Trbv4A0A075B5I2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trbv4A0A075B5I2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trbv4A0A075B5I2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.71■□□□□ 0.91
Trbv4A0A075B5I2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trbv4A0A075B5I2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv4A0A075B5I2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv4A0A075B5I2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms