Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Gm10478-201ENSMUST00000084451 396 ntBASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.14□□□□□ -0.47
Crlf3Q9Z2L7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Crlf3Q9Z2L7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Gm8018-201ENSMUST00000173536 789 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.12□□□□□ -0.47
Crlf3Q9Z2L7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms