Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcb1Q9Z0H3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm15881-201ENSMUST00000148792 942 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm26047-201ENSMUST00000157308 113 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm27530-201ENSMUST00000184096 98 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm26047-202ENSMUST00000198840 115 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smarcb1Q9Z0H3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcb1Q9Z0H3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm24514-201ENSMUST00000174961 285 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm6114-201ENSMUST00000182472 968 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm6450-201ENSMUST00000200896 574 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.45□□□□□ -0.42
Smarcb1Q9Z0H3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms