Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm14058-201ENSMUST00000116082 735 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm5419-201ENSMUST00000119301 527 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm9136-201ENSMUST00000193368 454 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm9555-201ENSMUST00000200908 583 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm17931-201ENSMUST00000208132 634 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm21811-201ENSMUST00000096485 930 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lhx9Q9WUH2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm13035-201ENSMUST00000117496 342 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm12501-201ENSMUST00000119163 529 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm12036-201ENSMUST00000120008 530 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm18893-201ENSMUST00000198416 943 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lhx9Q9WUH2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Gm13408-201ENSMUST00000119822 798 ntBASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Gm13935-201ENSMUST00000121859 798 ntBASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lhx9Q9WUH2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms