Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm13888-201ENSMUST00000119148 422 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm22730-201ENSMUST00000158085 171 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm26361-201ENSMUST00000158868 186 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm6098-201ENSMUST00000180234 330 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm29588-201ENSMUST00000185738 298 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 AC104906.1-201ENSMUST00000218122 913 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 AC167202.1-201ENSMUST00000219027 331 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm5781-201ENSMUST00000219792 443 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Spcs1-203ENSMUST00000226374 592 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm16372-201ENSMUST00000073088 450 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm42462-201ENSMUST00000196543 1363 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Lhx6Q9R1R0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Pfn4-201ENSMUST00000020967 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm14840-201ENSMUST00000122135 594 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm22817-201ENSMUST00000157448 356 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm18416-201ENSMUST00000175635 1003 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm6321-201ENSMUST00000194460 1090 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 AC154724.1-201ENSMUST00000225782 821 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lhx6Q9R1R0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms