Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Clcf1Q9QZM3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm14277-201ENSMUST00000121195 360 ntBASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Clcf1Q9QZM3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Mir7070-201ENSMUST00000183657 86 ntBASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm8385-201ENSMUST00000058999 643 ntBASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Clcf1Q9QZM3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Clcf1Q9QZM3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms