Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trem1Q9JKE2 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm13453-201ENSMUST00000118708 357 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm26315-201ENSMUST00000083890 321 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trem1Q9JKE2 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Gm37759-201ENSMUST00000194155 3246 ntBASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Gm19078-201ENSMUST00000206311 727 ntBASIC10.73□□□□□ -0.69
Trem1Q9JKE2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trem1Q9JKE2 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms