Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 AC138767.1-201ENSMUST00000222661 415 ntBASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Smco4Q9JIS3 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm12291-201ENSMUST00000121627 311 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm18766-201ENSMUST00000189811 808 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Smco4Q9JIS3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smco4Q9JIS3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms