Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.02□□□□□ -0.64
ClpxQ9JHS4 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Rmrp-201ENSMUST00000157463 271 ntBASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm17208-201ENSMUST00000168388 535 ntBASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm6007-201ENSMUST00000208170 823 ntBASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm10478-201ENSMUST00000084451 396 ntBASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ClpxQ9JHS4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm27572-201ENSMUST00000183702 255 ntBASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm4034-201ENSMUST00000187674 480 ntBASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClpxQ9JHS4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpxQ9JHS4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpxQ9JHS4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpxQ9JHS4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms