Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm13809-201ENSMUST00000117921 597 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm14247-201ENSMUST00000120950 237 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm10774-201ENSMUST00000188689 204 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Gm5705-201ENSMUST00000066241 711 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim54Q9ERP3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim54Q9ERP3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm11663-201ENSMUST00000117888 290 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm11667-201ENSMUST00000119828 486 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Mir7686-201ENSMUST00000200604 57 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm10179-201ENSMUST00000086233 688 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim54Q9ERP3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.01□□□□□ -0.33
Trim54Q9ERP3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim54Q9ERP3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms