Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm16570-201ENSMUST00000161951 436 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm3096-201ENSMUST00000185770 364 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubb3Q9ERD7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm37466-201ENSMUST00000195692 652 ntBASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tubb3Q9ERD7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tubb3Q9ERD7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms