Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-4Q9EQM3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm14213-201ENSMUST00000119778 768 ntBASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm19587-201ENSMUST00000191395 545 ntBASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm29763-201ENSMUST00000205306 616 ntBASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-4Q9EQM3 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15615-201ENSMUST00000118876 198 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm24248-201ENSMUST00000157321 322 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm9507-202ENSMUST00000180157 654 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-4Q9EQM3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-4Q9EQM3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms