Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.26□□□□□ -0.61
Hmgn3Q9DCB1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm6007-201ENSMUST00000208170 823 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gm26232-201ENSMUST00000083360 166 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hmgn3Q9DCB1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Gm8805-201ENSMUST00000117848 313 ntBASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hmgn3Q9DCB1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms