Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc97Q9DBT3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm14127-201ENSMUST00000117906 678 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm13736-201ENSMUST00000119272 253 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm6007-201ENSMUST00000208170 823 ntBASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc97Q9DBT3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm37424-201ENSMUST00000191727 561 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc97Q9DBT3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms