Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm8213-201ENSMUST00000118191 441 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm9022-201ENSMUST00000182482 992 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm27437-201ENSMUST00000183429 107 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm27331-201ENSMUST00000183705 60 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm38671-201ENSMUST00000200573 130 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim42Q9D2H5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Snord83b-201ENSMUST00000104546 94 ntBASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Mir6392-201ENSMUST00000184924 108 ntBASIC12.06□□□□□ -0.48
Trim42Q9D2H5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.06□□□□□ -0.48
Trim42Q9D2H5 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim42Q9D2H5 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gm19165-201ENSMUST00000204453 1982 ntBASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gm27243-201ENSMUST00000183964 521 ntBASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim42Q9D2H5 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms