Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Ssbp3Q9D032 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Mir6927-201ENSMUST00000184494 71 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm28450-201ENSMUST00000187349 638 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm18711-201ENSMUST00000199341 750 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm43962-201ENSMUST00000203898 190 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ssbp3Q9D032 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm26461-201ENSMUST00000175064 290 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 AY036118-201ENSMUST00000200021 923 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Gm32390-201ENSMUST00000212713 1172 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Ssbp3Q9D032 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms