Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm24548-201ENSMUST00000158650 108 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm40466-201ENSMUST00000212174 422 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Gm14247-201ENSMUST00000120950 237 ntBASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Gm16379-201ENSMUST00000161469 348 ntBASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Gm8762-201ENSMUST00000193486 339 ntBASIC12.35□□□□□ -0.43
Snf8Q9CZ28 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Snf8Q9CZ28 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Gm13829-201ENSMUST00000119600 138 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Gm17931-201ENSMUST00000208132 634 ntBASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Snf8Q9CZ28 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms