Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Gm16177-201ENSMUST00000120728 718 ntBASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Gm1335-201ENSMUST00000121653 386 ntBASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Gm7809-201ENSMUST00000153199 742 ntBASIC11.9□□□□□ -0.5
Ssu72Q9CY97 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ssu72Q9CY97 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ssu72Q9CY97 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ssu72Q9CY97 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ssu72Q9CY97 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.89□□□□□ -0.51
Ssu72Q9CY97 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm10254-201ENSMUST00000052888 867 ntBASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ssu72Q9CY97 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm15806-201ENSMUST00000120696 955 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms