Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rnaseh2aQ9CWY8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm23595-201ENSMUST00000104306 130 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm17221-201ENSMUST00000163909 481 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm17073-201ENSMUST00000168069 556 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm8197-202ENSMUST00000193422 934 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm37851-201ENSMUST00000193871 889 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm9487-201ENSMUST00000216600 472 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.22□□□□□ -0.13
Rnaseh2aQ9CWY8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm12418-201ENSMUST00000118116 942 ntBASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnaseh2aQ9CWY8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnaseh2aQ9CWY8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnaseh2aQ9CWY8 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms