Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm9996-201ENSMUST00000070359 913 ntBASIC14.11□□□□□ -0.15
Smc3Q9CW03 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.11□□□□□ -0.15
Smc3Q9CW03 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smc3Q9CW03 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm23931-201ENSMUST00000103842 109 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm11425-201ENSMUST00000119608 498 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm14832-201ENSMUST00000121289 322 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm24845-201ENSMUST00000158034 109 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Gm9396-201ENSMUST00000076703 567 ntBASIC14.1□□□□□ -0.15
Smc3Q9CW03 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc3Q9CW03 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Mir1982-201ENSMUST00000157368 74 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm43133-201ENSMUST00000197472 463 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.09□□□□□ -0.15
Smc3Q9CW03 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smc3Q9CW03 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smc3Q9CW03 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc3Q9CW03 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc3Q9CW03 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.08□□□□□ -0.15
Smc3Q9CW03 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc3Q9CW03 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Smc3Q9CW03 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smc3Q9CW03 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc3Q9CW03 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smc3Q9CW03 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc3Q9CW03 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc3Q9CW03 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms