Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm14127-201ENSMUST00000117906 678 ntBASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm9230-201ENSMUST00000188228 532 ntBASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm38241-201ENSMUST00000192641 898 ntBASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.69□□□□□ -0.22
Trim11Q99PQ2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim11Q99PQ2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm14644-201ENSMUST00000116671 647 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm12015-201ENSMUST00000117065 843 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm9136-201ENSMUST00000193368 454 ntBASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim11Q99PQ2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim11Q99PQ2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms