Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm27243-201ENSMUST00000183964 521 ntBASIC11.78□□□□□ -0.52
Trim16Q99PP9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.78□□□□□ -0.52
Trim16Q99PP9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim16Q99PP9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.77□□□□□ -0.52
Trim16Q99PP9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim16Q99PP9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm6007-201ENSMUST00000208170 823 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm10076-201ENSMUST00000073238 384 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim16Q99PP9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm14723-201ENSMUST00000118686 215 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.76□□□□□ -0.53
Trim16Q99PP9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim16Q99PP9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms