Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.87□□□□□ -0.51
Cdh23Q99PF4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm21778-201ENSMUST00000178779 471 ntBASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm8255-201ENSMUST00000218693 305 ntBASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.87□□□□□ -0.51
Cdh23Q99PF4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gm12345-201ENSMUST00000119288 898 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdh23Q99PF4 Gm12247-201ENSMUST00000117585 670 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm15815-201ENSMUST00000120569 255 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm6612-201ENSMUST00000170777 395 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm23647-201ENSMUST00000175042 109 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Rn5s-201ENSMUST00000177555 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm22109-201ENSMUST00000177995 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm22291-201ENSMUST00000178027 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm23284-201ENSMUST00000178069 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm25018-201ENSMUST00000179081 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm25212-201ENSMUST00000179432 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm26391-201ENSMUST00000179843 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm24089-201ENSMUST00000093696 109 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms