Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm27514-201ENSMUST00000183692 110 ntBASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdk5rap3Q99LM2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Gm22018-201ENSMUST00000104357 131 ntBASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cdk5rap3Q99LM2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm5706-201ENSMUST00000181525 993 ntBASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Gm9996-201ENSMUST00000070359 913 ntBASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cdk5rap3Q99LM2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms